BIOL40540 Data Management in the Life Sciences

Academic Year 2023/2024

During this unique module students will attend a series of lectures and workshops exploring all aspects of data management for life sciences research. Topics covered will include best practices for the collection and storage of scientific data, interpreting and interrogating data, accessing public data repositories to aid hypothesis building, best practice for presenting data, and an overview of typical file formats commonly used for biological data. Though focussed on data management, this module will cover briefly basic statistical methods used by biologists, with several examples of data management tools being introduced.
Through a series of continual assessments and presentations, students will put into practice all aspects of the topics covered in this module.

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Curricular information is subject to change

Learning Outcomes:

On completion of this module students will have explored best practices in managing, analysing and presenting their scientific data as they move forward in their research careers. Students will participate in tasks highlighting importance of data interpretation, communicating their findings in an accurate and appropriate manner to the wider scientific community. Specifically, students will:

• Organise and manipulate data on a computer using a variety of different tools
• Familiarise themselves with a Unix environment
• Navigate and explore biological databases
• Encrypt/decrypt data
• Apply statistical methods and hypothesis testing to life science datasets
• Explore various concepts in data management
• Communicate data using a variety of graphs and tables, while also objectively critiquing each method
• Answer questions pertaining to data management and analysis in life sciences.

Skills Developed

In this module, the students will be introduced to the following skills, which will be developed throughout its duration:
• Using Python/Perl programming for easy data manipulation
• Effective presentation and writing of technical and scientific information
• Apply the R statistical language to analyse biological datasets
• Learn concepts in data encryption and storage

Indicative Module Content:

1. Getting started with data
2. The data management plan
3. File formats and data encryption
4. Public biological data and databases
5. Data compression
6. Basic statistical analysis for data science
7. Big data and Machine Learning
8. Clustering methods in statistics
9. Hypothesis testing in statistics
10. Phylogenetics as a data case study
11. Displaying your data (and what not to do)

Student Effort Hours: 
Student Effort Type Hours
Specified Learning Activities

24

Autonomous Student Learning

101

Total

125

Approaches to Teaching and Learning:
This module is based around a series of problems sheets and practical tasks pertaining to data analysis delivered through workshops. These practical tasks revolve around various aspects covered in the lectures and are applicable to the various assignments within this module.

Lectures will be interactive, providing core learning materials covered in the module.
 
Requirements, Exclusions and Recommendations

Not applicable to this module.


Module Requisites and Incompatibles
Not applicable to this module.
 
Assessment Strategy  
Description Timing Open Book Exam Component Scale Must Pass Component % of Final Grade
Assignment: A biological report requiring the application of data analysis, hypothesis testing and research. Coursework (End of Trimester) n/a Graded Yes

50

Assignment: Data management plan covering various aspects of a scientific study Coursework (End of Trimester) n/a Graded Yes

20

Continuous Assessment: Graded tasks accompanying practical sessions to be completed Throughout the Trimester n/a Graded Yes

30


Carry forward of passed components
No
 
Resit In Terminal Exam
Spring No
Please see Student Jargon Buster for more information about remediation types and timing. 
Feedback Strategy/Strategies

• Feedback individually to students, post-assessment
• Peer review activities

How will my Feedback be Delivered?

Not yet recorded.

Timetabling information is displayed only for guidance purposes, relates to the current Academic Year only and is subject to change.
 
Autumn
     
Lecture Offering 1 Week(s) - 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13 Mon 16:00 - 17:50